Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.72■□□□□ 0.91
FAM43AQ8N2R8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 AC136632.2-201ENST00000512891 861 ntBASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
FAM43AQ8N2R8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FAM43AQ8N2R8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 LYSMD4-203ENST00000378904 2122 ntBASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 AC254562.1-201ENST00000417586 456 ntBASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 AC002310.6-201ENST00000624451 1377 ntBASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM43AQ8N2R8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FAM43AQ8N2R8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.68■□□□□ 0.9
FAM43AQ8N2R8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM43AQ8N2R8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.68■□□□□ 0.9
FAM43AQ8N2R8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FAM43AQ8N2R8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms