Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
DEPDC4Q8N2C3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 AC011840.4-201ENST00000578471 627 ntBASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 EGFEM1P-202ENST00000431685 1563 ntBASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
DEPDC4Q8N2C3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 AP002383.4-201ENST00000442518 975 ntBASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 NUS1P1-201ENST00000446295 882 ntBASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 TOB2P1-201ENST00000469761 992 ntBASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 AC012615.1-201ENST00000565797 1299 ntBASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 AL121772.3-201ENST00000610840 674 ntBASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 AC004263.2-201ENST00000617183 678 ntBASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
DEPDC4Q8N2C3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms