Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 MIR3909-201ENST00000579518 119 ntBASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 AC004233.3-201ENST00000607794 1269 ntBASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 AC018529.1-201ENST00000613063 361 ntBASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 AC131009.4-201ENST00000624048 1740 ntBASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEFF1Q8IYR6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 AC106820.2-201ENST00000563775 3264 ntBASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 AL596325.1-201ENST00000563991 1082 ntBASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 SPDYE22P-201ENST00000582158 798 ntBASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEFF1Q8IYR6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEFF1Q8IYR6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 TSSK5P-201ENST00000423978 907 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 AC007274.1-201ENST00000439805 662 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 RN7SL692P-201ENST00000464677 288 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 MEIS3P1-201ENST00000495167 958 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 CR383656.12-201ENST00000549567 513 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 RARRES2P9-201ENST00000565168 469 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 SPDYE12P-201ENST00000618416 771 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 EGFEM1P-202ENST00000431685 1563 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 AC022144.1-201ENST00000602255 1580 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms