Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 AC091304.2-201ENST00000564639 760 ntBASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 AL732292.2-201ENST00000609649 430 ntBASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 AL139288.1-201ENST00000623748 933 ntBASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST3H2AQ7L7L0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 AC067930.6-201ENST00000623257 4947 ntBASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 PCDHB19P-201ENST00000570871 2371 ntBASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 PCDHA14-201ENST00000506751 2298 ntBASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 KRT18P31-201ENST00000506277 1292 ntBASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST3H2AQ7L7L0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 NKAPP1-205ENST00000585790 367 ntBASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 FLJ38576-201ENST00000623820 2459 ntBASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms