Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 AP002469.2-201ENST00000531724 424 ntBASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 REXO1L3P-201ENST00000622202 1288 ntBASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 AF228730.7-201ENST00000641842 219 ntBASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 TUBB7P-202ENST00000428444 1305 ntBASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NHLRC1Q6VVB1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 AC103702.1-201ENST00000548801 2630 ntBASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 AC004870.1-201ENST00000315132 882 ntBASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 AC073648.2-201ENST00000510116 352 ntBASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 FAM215A-202ENST00000632077 792 ntBASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NHLRC1Q6VVB1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms