Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 HNRNPUP1-201ENST00000554987 333 ntBASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 AC015967.2-201ENST00000624092 234 ntBASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 AC006435.4-201ENST00000625037 234 ntBASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 AL356737.1-201ENST00000634391 234 ntBASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 AL033527.5-202ENST00000641632 1098 ntBASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST2H2BCQ6DN03 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 HCG11-201ENST00000411553 5696 ntBASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 CALR4P-201ENST00000431943 946 ntBASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 AC025048.3-201ENST00000590609 569 ntBASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 AL139327.4-201ENST00000612362 153 ntBASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST2H2BCQ6DN03 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 NOC2LP1-202ENST00000452600 2235 ntBASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 RPL7P3-201ENST00000441388 714 ntBASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 TDH-203ENST00000531764 1110 ntBASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 RN7SL560P-201ENST00000577943 264 ntBASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST2H2BCQ6DN03 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms