Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 TSPY12P-201ENST00000421279 868 ntBASIC15.91■□□□□ 0.14
LPCAT4Q643R3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 FAM197Y4-202ENST00000622692 608 ntBASIC15.91■□□□□ 0.14
LPCAT4Q643R3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.91■□□□□ 0.14
LPCAT4Q643R3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 AC023908.3-201ENST00000564211 3047 ntBASIC15.91■□□□□ 0.14
LPCAT4Q643R3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 GGT4P-201ENST00000623672 1708 ntBASIC15.9■□□□□ 0.14
LPCAT4Q643R3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LPCAT4Q643R3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 AC006449.6-201ENST00000612330 2296 ntBASIC15.89■□□□□ 0.13
LPCAT4Q643R3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 CD99P1-205ENST00000527459 561 ntBASIC15.89■□□□□ 0.13
LPCAT4Q643R3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 KRT89P-201ENST00000620027 1478 ntBASIC15.89■□□□□ 0.13
LPCAT4Q643R3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LPCAT4Q643R3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms