Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 AL773604.1-201ENST00000617417 272 ntBASIC20.12■□□□□ 0.81
RNF20Q5VTR2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF20Q5VTR2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 AP002469.2-201ENST00000531724 424 ntBASIC20.11■□□□□ 0.81
RNF20Q5VTR2 AL160237.2-201ENST00000556165 472 ntBASIC20.11■□□□□ 0.81
RNF20Q5VTR2 AC012640.2-201ENST00000561606 901 ntBASIC20.11■□□□□ 0.81
RNF20Q5VTR2 AC148477.8-201ENST00000624298 468 ntBASIC20.11■□□□□ 0.81
RNF20Q5VTR2 FAM215A-202ENST00000632077 792 ntBASIC20.11■□□□□ 0.81
RNF20Q5VTR2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 AP002414.3-201ENST00000589352 1468 ntBASIC20.11■□□□□ 0.81
RNF20Q5VTR2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF20Q5VTR2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 AC131009.4-201ENST00000624048 1740 ntBASIC20.1■□□□□ 0.81
RNF20Q5VTR2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF20Q5VTR2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 UBALD1-205ENST00000590891 2641 ntBASIC20.09■□□□□ 0.81
RNF20Q5VTR2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 MIR4492-201ENST00000581627 80 ntBASIC20.09■□□□□ 0.81
RNF20Q5VTR2 AC104692.2-201ENST00000603054 253 ntBASIC20.09■□□□□ 0.81
RNF20Q5VTR2 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 AL353732.1-201ENST00000569618 1459 ntBASIC20.09■□□□□ 0.81
RNF20Q5VTR2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF20Q5VTR2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF20Q5VTR2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF20Q5VTR2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms