Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 AC135776.1-201ENST00000319817 2481 ntBASIC16.14■□□□□ 0.17
RIF1Q5UIP0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 DUX4L45-201ENST00000566406 1057 ntBASIC16.13■□□□□ 0.17
RIF1Q5UIP0 AC004461.2-201ENST00000629517 803 ntBASIC16.13■□□□□ 0.17
RIF1Q5UIP0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 AC073592.3-201ENST00000625118 1834 ntBASIC16.13■□□□□ 0.17
RIF1Q5UIP0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.13■□□□□ 0.17
RIF1Q5UIP0 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.13■□□□□ 0.17
RIF1Q5UIP0 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIF1Q5UIP0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 AC091046.1-201ENST00000331871 207 ntBASIC16.12■□□□□ 0.17
RIF1Q5UIP0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 SCARNA20.5-201ENST00000516991 142 ntBASIC16.12■□□□□ 0.17
RIF1Q5UIP0 RARRES2P5-201ENST00000564013 466 ntBASIC16.12■□□□□ 0.17
RIF1Q5UIP0 MIR5189-201ENST00000577370 114 ntBASIC16.12■□□□□ 0.17
RIF1Q5UIP0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.12■□□□□ 0.17
RIF1Q5UIP0 AC128714.1-201ENST00000637035 887 ntBASIC16.12■□□□□ 0.17
RIF1Q5UIP0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RIF1Q5UIP0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 EGFEM1P-202ENST00000431685 1563 ntBASIC16.11■□□□□ 0.17
RIF1Q5UIP0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 TDH-203ENST00000531764 1110 ntBASIC16.11■□□□□ 0.17
RIF1Q5UIP0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 MIR4492-201ENST00000581627 80 ntBASIC16.11■□□□□ 0.17
RIF1Q5UIP0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 CU634019.7-201ENST00000624153 1185 ntBASIC16.11■□□□□ 0.17
RIF1Q5UIP0 FP236241.2-201ENST00000624906 1185 ntBASIC16.11■□□□□ 0.17
RIF1Q5UIP0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.11■□□□□ 0.17
RIF1Q5UIP0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIF1Q5UIP0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms