Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RC3H1Q5TC82 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RC3H1Q5TC82 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 MIR658-201ENST00000385210 100 ntBASIC20.93■□□□□ 0.94
RC3H1Q5TC82 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 AC093724.1-201ENST00000448659 1027 ntBASIC20.93■□□□□ 0.94
RC3H1Q5TC82 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 AC004461.2-201ENST00000629517 803 ntBASIC20.93■□□□□ 0.94
RC3H1Q5TC82 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RC3H1Q5TC82 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RC3H1Q5TC82 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 MYCLP2-201ENST00000449268 967 ntBASIC20.91■□□□□ 0.94
RC3H1Q5TC82 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RC3H1Q5TC82 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 ELK1P1-201ENST00000485699 580 ntBASIC20.9■□□□□ 0.94
RC3H1Q5TC82 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 TPRX2P-201ENST00000535362 881 ntBASIC20.9■□□□□ 0.94
RC3H1Q5TC82 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 AC023310.3-201ENST00000557027 670 ntBASIC20.9■□□□□ 0.94
RC3H1Q5TC82 AC100756.1-201ENST00000562736 682 ntBASIC20.9■□□□□ 0.94
RC3H1Q5TC82 AC138749.3-201ENST00000567691 622 ntBASIC20.9■□□□□ 0.94
RC3H1Q5TC82 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 AC026979.3-201ENST00000607315 403 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms