Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNFT1Q5M7Z0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 AC141586.5-201ENST00000624546 2050 ntBASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 AL671710.1-201ENST00000610245 2349 ntBASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 AC124947.2-201ENST00000547118 1133 ntBASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNFT1Q5M7Z0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AL035633.1-201ENST00000406139 838 ntBASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AC107890.1-201ENST00000422478 521 ntBASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AC125807.1-201ENST00000483097 614 ntBASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 AC021097.1-201ENST00000607902 574 ntBASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 FO538757.1-201ENST00000623083 1397 ntBASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.09■□□□□ 0.01
RNFT1Q5M7Z0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNFT1Q5M7Z0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms