Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 AC092474.2-201ENST00000424288 719 ntBASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 ADH5P3-201ENST00000433842 1137 ntBASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 DNAJB3-202ENST00000449667 1266 ntBASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 AC079781.4-201ENST00000641908 219 ntBASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 LTB4R2-202ENST00000528054 3092 ntBASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 AC106886.4-201ENST00000623557 2502 ntBASIC17.27■□□□□ 0.36
MS4A13Q5J8X5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 KRT8P39-201ENST00000396270 1433 ntBASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MS4A13Q5J8X5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 AL355306.1-201ENST00000415580 579 ntBASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 AP001160.2-201ENST00000596071 487 ntBASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A13Q5J8X5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 AC254562.1-201ENST00000417586 456 ntBASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 AL671277.1-201ENST00000429656 993 ntBASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.25■□□□□ 0.35
MS4A13Q5J8X5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms