Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HERC4Q5GLZ8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 FLJ38576-201ENST00000623820 2459 ntBASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERC4Q5GLZ8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 AC023274.1-201ENST00000418278 595 ntBASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 AC087163.2-201ENST00000457299 853 ntBASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 AC005593.1-201ENST00000624894 515 ntBASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 AC078925.2-201ENST00000624013 1973 ntBASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 KRT8P49-201ENST00000604166 1432 ntBASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC4Q5GLZ8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AL645728.1-201ENST00000366221 2101 ntBASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AL645939.2-201ENST00000427340 991 ntBASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AC007967.2-201ENST00000432613 625 ntBASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 SNHG9-202ENST00000564014 471 ntBASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 AC008667.4-201ENST00000607370 168 ntBASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 GGTLC5P-201ENST00000617623 998 ntBASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 PGM5P2-202ENST00000637225 1043 ntBASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC4Q5GLZ8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms