Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 ACTG1P4-201ENST00000425123 1122 ntBASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 ACTG1P14-201ENST00000446382 1122 ntBASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 LINC01451-201ENST00000623792 534 ntBASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144BQ3MJ40 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 AL590787.1-201ENST00000568856 1315 ntBASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 AC091812.2-201ENST00000619081 385 ntBASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144BQ3MJ40 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 AC011270.2-201ENST00000624293 2550 ntBASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 CXCL1P1-201ENST00000502804 216 ntBASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 AC106028.4-201ENST00000614509 607 ntBASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144BQ3MJ40 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 AC116353.5-201ENST00000638148 1699 ntBASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC144BQ3MJ40 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms