Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 AL844908.2-201ENST00000609461 460 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 TEX28P1-201ENST00000613479 1221 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 TEX28P2-201ENST00000617764 1221 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AL035456.1-201ENST00000456064 1369 ntBASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 COX5BP8-201ENST00000416911 349 ntBASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AC013467.2-201ENST00000605472 835 ntBASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AC008738.7-201ENST00000609744 511 ntBASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 SPTSSB-204ENST00000617024 1292 ntBASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 AL671710.1-201ENST00000610245 2349 ntBASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM71Q2Q1W2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 RPL37AP1-201ENST00000412502 279 ntBASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 AL358472.5-202ENST00000641448 1267 ntBASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 SNX33P1-201ENST00000592116 1762 ntBASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM71Q2Q1W2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
TRIM71Q2Q1W2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRIM71Q2Q1W2 AC134043.2-201ENST00000624206 2238 ntBASIC18.21■□□□□ 0.5
TRIM71Q2Q1W2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM71Q2Q1W2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms