Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.54■□□□□ 0.72
SSRP1Q08945 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SSRP1Q08945 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSRP1Q08945 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.53■□□□□ 0.72
SSRP1Q08945 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSRP1Q08945 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.53■□□□□ 0.72
SSRP1Q08945 CRYGEP-201ENST00000412192 528 ntBASIC19.53■□□□□ 0.72
SSRP1Q08945 AC026396.1-201ENST00000419388 421 ntBASIC19.53■□□□□ 0.72
SSRP1Q08945 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.53■□□□□ 0.72
SSRP1Q08945 VN2R19P-201ENST00000442399 1052 ntBASIC19.53■□□□□ 0.72
SSRP1Q08945 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.53■□□□□ 0.72
SSRP1Q08945 AL139011.1-202ENST00000642063 584 ntBASIC19.53■□□□□ 0.72
SSRP1Q08945 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSRP1Q08945 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SSRP1Q08945 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SSRP1Q08945 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SSRP1Q08945 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSRP1Q08945 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.52■□□□□ 0.72
SSRP1Q08945 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.52■□□□□ 0.72
SSRP1Q08945 FAM185BP-201ENST00000443595 716 ntBASIC19.52■□□□□ 0.72
SSRP1Q08945 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.52■□□□□ 0.72
SSRP1Q08945 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.52■□□□□ 0.72
SSRP1Q08945 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.52■□□□□ 0.72
SSRP1Q08945 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.52■□□□□ 0.72
SSRP1Q08945 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.52■□□□□ 0.72
SSRP1Q08945 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 Z83851.2-201ENST00000609564 659 ntBASIC19.52■□□□□ 0.72
SSRP1Q08945 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.52■□□□□ 0.72
SSRP1Q08945 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.52■□□□□ 0.72
SSRP1Q08945 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.52■□□□□ 0.72
SSRP1Q08945 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.52■□□□□ 0.72
SSRP1Q08945 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSRP1Q08945 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SSRP1Q08945 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSRP1Q08945 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SSRP1Q08945 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.52■□□□□ 0.72
SSRP1Q08945 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSRP1Q08945 AC006538.1-201ENST00000567905 1585 ntBASIC19.52■□□□□ 0.71
SSRP1Q08945 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SSRP1Q08945 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.52■□□□□ 0.71
SSRP1Q08945 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SSRP1Q08945 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSRP1Q08945 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SSRP1Q08945 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.51■□□□□ 0.71
SSRP1Q08945 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.51■□□□□ 0.71
SSRP1Q08945 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SSRP1Q08945 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SSRP1Q08945 CXCL1P1-201ENST00000502804 216 ntBASIC19.51■□□□□ 0.71
SSRP1Q08945 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.51■□□□□ 0.71
SSRP1Q08945 AC087641.1-201ENST00000557561 1021 ntBASIC19.51■□□□□ 0.71
SSRP1Q08945 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.51■□□□□ 0.71
SSRP1Q08945 CYP2A7P1-201ENST00000595391 815 ntBASIC19.51■□□□□ 0.71
SSRP1Q08945 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SSRP1Q08945 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.51■□□□□ 0.71
SSRP1Q08945 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.51■□□□□ 0.71
SSRP1Q08945 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.51■□□□□ 0.71
SSRP1Q08945 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSRP1Q08945 IL9RP2-201ENST00000423948 1312 ntBASIC19.51■□□□□ 0.71
SSRP1Q08945 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.51■□□□□ 0.71
SSRP1Q08945 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms