Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
DDR1Q08345 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.67■□□□□ 0.9
DDR1Q08345 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.67■□□□□ 0.9
DDR1Q08345 AC023310.3-201ENST00000557027 670 ntBASIC20.67■□□□□ 0.9
DDR1Q08345 AC100756.1-201ENST00000562736 682 ntBASIC20.67■□□□□ 0.9
DDR1Q08345 AC138749.3-201ENST00000567691 622 ntBASIC20.67■□□□□ 0.9
DDR1Q08345 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.67■□□□□ 0.9
DDR1Q08345 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.67■□□□□ 0.9
DDR1Q08345 AC116165.1-201ENST00000611806 668 ntBASIC20.67■□□□□ 0.9
DDR1Q08345 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DDR1Q08345 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
DDR1Q08345 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
DDR1Q08345 AC016396.2-201ENST00000562575 1417 ntBASIC20.67■□□□□ 0.9
DDR1Q08345 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DDR1Q08345 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DDR1Q08345 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDR1Q08345 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.66■□□□□ 0.9
DDR1Q08345 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.66■□□□□ 0.9
DDR1Q08345 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.66■□□□□ 0.9
DDR1Q08345 MYCLP2-201ENST00000449268 967 ntBASIC20.66■□□□□ 0.9
DDR1Q08345 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.66■□□□□ 0.9
DDR1Q08345 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 AC092552.1-201ENST00000547243 906 ntBASIC20.66■□□□□ 0.9
DDR1Q08345 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDR1Q08345 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
DDR1Q08345 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
DDR1Q08345 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.66■□□□□ 0.9
DDR1Q08345 AC004461.2-201ENST00000629517 803 ntBASIC20.66■□□□□ 0.9
DDR1Q08345 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDR1Q08345 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
DDR1Q08345 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDR1Q08345 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDR1Q08345 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
DDR1Q08345 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DDR1Q08345 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.66■□□□□ 0.9
DDR1Q08345 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.65■□□□□ 0.9
DDR1Q08345 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DDR1Q08345 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.65■□□□□ 0.9
DDR1Q08345 REXO1L6P-201ENST00000603433 1515 ntBASIC20.65■□□□□ 0.9
DDR1Q08345 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.65■□□□□ 0.9
DDR1Q08345 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
DDR1Q08345 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
DDR1Q08345 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.65■□□□□ 0.9
DDR1Q08345 SLC25A6P5-201ENST00000435663 894 ntBASIC20.65■□□□□ 0.9
DDR1Q08345 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.65■□□□□ 0.9
DDR1Q08345 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.65■□□□□ 0.9
DDR1Q08345 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.65■□□□□ 0.9
DDR1Q08345 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.65■□□□□ 0.9
DDR1Q08345 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.65■□□□□ 0.9
DDR1Q08345 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.65■□□□□ 0.9
DDR1Q08345 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DDR1Q08345 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
DDR1Q08345 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
DDR1Q08345 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDR1Q08345 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.64■□□□□ 0.9
DDR1Q08345 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.64■□□□□ 0.9
DDR1Q08345 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.64■□□□□ 0.9
DDR1Q08345 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
DDR1Q08345 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.64■□□□□ 0.89
DDR1Q08345 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
DDR1Q08345 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.64■□□□□ 0.89
DDR1Q08345 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.64■□□□□ 0.89
DDR1Q08345 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
DDR1Q08345 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.64■□□□□ 0.89
DDR1Q08345 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDR1Q08345 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DDR1Q08345 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms