Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.26□□□□□ -0.13
COL10A1Q03692 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 AGGF1P2-201ENST00000426656 2106 ntBASIC14.26□□□□□ -0.13
COL10A1Q03692 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
COL10A1Q03692 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.25□□□□□ -0.13
COL10A1Q03692 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 RNF216P1-203ENST00000404404 2427 ntBASIC14.25□□□□□ -0.13
COL10A1Q03692 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.25□□□□□ -0.13
COL10A1Q03692 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.25□□□□□ -0.13
COL10A1Q03692 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.25□□□□□ -0.13
COL10A1Q03692 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.25□□□□□ -0.13
COL10A1Q03692 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL10A1Q03692 PTCHD3P3-201ENST00000403073 906 ntBASIC14.25□□□□□ -0.13
COL10A1Q03692 ELK2BP-201ENST00000415014 1224 ntBASIC14.25□□□□□ -0.13
COL10A1Q03692 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 AF186996.4-201ENST00000467186 377 ntBASIC14.25□□□□□ -0.13
COL10A1Q03692 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.25□□□□□ -0.13
COL10A1Q03692 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
COL10A1Q03692 AL691432.3-201ENST00000621860 400 ntBASIC14.25□□□□□ -0.13
COL10A1Q03692 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.25□□□□□ -0.13
COL10A1Q03692 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.25□□□□□ -0.13
COL10A1Q03692 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.25□□□□□ -0.13
COL10A1Q03692 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
COL10A1Q03692 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL10A1Q03692 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
COL10A1Q03692 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
COL10A1Q03692 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 PI4KAP1-204ENST00000612579 1703 ntBASIC14.24□□□□□ -0.13
COL10A1Q03692 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
COL10A1Q03692 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.24□□□□□ -0.13
COL10A1Q03692 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 AC079781.3-201ENST00000449110 356 ntBASIC14.24□□□□□ -0.13
COL10A1Q03692 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.24□□□□□ -0.13
COL10A1Q03692 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 DUX4L17-201ENST00000557360 1267 ntBASIC14.24□□□□□ -0.13
COL10A1Q03692 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
COL10A1Q03692 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms