Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CCNA1P78396 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.02■□□□□ 0.64
CCNA1P78396 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCNA1P78396 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.02■□□□□ 0.64
CCNA1P78396 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCNA1P78396 FOXO1B-201ENST00000504678 1527 ntBASIC19.02■□□□□ 0.64
CCNA1P78396 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.02■□□□□ 0.64
CCNA1P78396 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.02■□□□□ 0.64
CCNA1P78396 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CCNA1P78396 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCNA1P78396 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.02■□□□□ 0.64
CCNA1P78396 AC009477.1-201ENST00000452936 217 ntBASIC19.02■□□□□ 0.64
CCNA1P78396 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.02■□□□□ 0.64
CCNA1P78396 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.02■□□□□ 0.64
CCNA1P78396 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.02■□□□□ 0.64
CCNA1P78396 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.02■□□□□ 0.64
CCNA1P78396 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.02■□□□□ 0.64
CCNA1P78396 AL589739.1-201ENST00000607720 493 ntBASIC19.02■□□□□ 0.64
CCNA1P78396 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.02■□□□□ 0.64
CCNA1P78396 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCNA1P78396 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.02■□□□□ 0.63
CCNA1P78396 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCNA1P78396 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCNA1P78396 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCNA1P78396 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCNA1P78396 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCNA1P78396 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CCNA1P78396 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCNA1P78396 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.02■□□□□ 0.63
CCNA1P78396 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCNA1P78396 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCNA1P78396 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.01■□□□□ 0.63
CCNA1P78396 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.01■□□□□ 0.63
CCNA1P78396 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 OR8S1-201ENST00000310194 1080 ntBASIC19.01■□□□□ 0.63
CCNA1P78396 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.01■□□□□ 0.63
CCNA1P78396 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 MTND6P24-201ENST00000440466 518 ntBASIC19.01■□□□□ 0.63
CCNA1P78396 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.01■□□□□ 0.63
CCNA1P78396 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 AC098859.1-201ENST00000502915 1238 ntBASIC19.01■□□□□ 0.63
CCNA1P78396 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.01■□□□□ 0.63
CCNA1P78396 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.01■□□□□ 0.63
CCNA1P78396 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.01■□□□□ 0.63
CCNA1P78396 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.01■□□□□ 0.63
CCNA1P78396 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCNA1P78396 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.01■□□□□ 0.63
CCNA1P78396 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNA1P78396 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19■□□□□ 0.63
CCNA1P78396 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCNA1P78396 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19■□□□□ 0.63
CCNA1P78396 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCNA1P78396 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCNA1P78396 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCNA1P78396 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCNA1P78396 COX5BP8-201ENST00000416911 349 ntBASIC19■□□□□ 0.63
CCNA1P78396 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19■□□□□ 0.63
CCNA1P78396 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19■□□□□ 0.63
CCNA1P78396 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19■□□□□ 0.63
CCNA1P78396 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19■□□□□ 0.63
CCNA1P78396 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 TEX28P1-201ENST00000613479 1221 ntBASIC19■□□□□ 0.63
CCNA1P78396 TEX28P2-201ENST00000617764 1221 ntBASIC19■□□□□ 0.63
CCNA1P78396 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms