Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.23■□□□□ 0.03
SUMO3P55854 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SUMO3P55854 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 AGGF1P2-201ENST00000426656 2106 ntBASIC15.22■□□□□ 0.03
SUMO3P55854 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SUMO3P55854 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.22■□□□□ 0.03
SUMO3P55854 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 PMS2P4-201ENST00000412466 1052 ntBASIC15.22■□□□□ 0.03
SUMO3P55854 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.22■□□□□ 0.03
SUMO3P55854 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.22■□□□□ 0.03
SUMO3P55854 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.22■□□□□ 0.03
SUMO3P55854 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.22■□□□□ 0.03
SUMO3P55854 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 AL031055.1-201ENST00000606362 631 ntBASIC15.22■□□□□ 0.03
SUMO3P55854 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.22■□□□□ 0.03
SUMO3P55854 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 AC004877.2-201ENST00000623941 599 ntBASIC15.22■□□□□ 0.03
SUMO3P55854 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.22■□□□□ 0.03
SUMO3P55854 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SUMO3P55854 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUMO3P55854 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.22■□□□□ 0.03
SUMO3P55854 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SUMO3P55854 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SUMO3P55854 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 BCAR1-209ENST00000546196 1340 ntBASIC15.21■□□□□ 0.03
SUMO3P55854 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.21■□□□□ 0.03
SUMO3P55854 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.21■□□□□ 0.03
SUMO3P55854 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
SUMO3P55854 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SUMO3P55854 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 PCDHA12-202ENST00000613593 2588 ntBASIC15.21■□□□□ 0.03
SUMO3P55854 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.21■□□□□ 0.03
SUMO3P55854 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.21■□□□□ 0.03
SUMO3P55854 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.21■□□□□ 0.03
SUMO3P55854 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.21■□□□□ 0.03
SUMO3P55854 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.21■□□□□ 0.03
SUMO3P55854 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.21■□□□□ 0.03
SUMO3P55854 AC109635.5-201ENST00000533593 962 ntBASIC15.21■□□□□ 0.03
SUMO3P55854 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 KRT19P2-202ENST00000557173 1012 ntBASIC15.21■□□□□ 0.03
SUMO3P55854 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.21■□□□□ 0.03
SUMO3P55854 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.21■□□□□ 0.03
SUMO3P55854 AC009053.2-201ENST00000563701 2365 ntBASIC15.21■□□□□ 0.03
SUMO3P55854 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.21■□□□□ 0.03
SUMO3P55854 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUMO3P55854 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SUMO3P55854 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.2■□□□□ 0.02
SUMO3P55854 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SUMO3P55854 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.2■□□□□ 0.02
SUMO3P55854 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUMO3P55854 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUMO3P55854 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms