Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LIMK2P53671 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 AP002414.1-201ENST00000391405 1147 ntBASIC17■□□□□ 0.31
LIMK2P53671 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17■□□□□ 0.31
LIMK2P53671 COX10-202ENST00000429152 875 ntTSL 2 BASIC17■□□□□ 0.31
LIMK2P53671 BX005266.1-201ENST00000473402 457 ntBASIC17■□□□□ 0.31
LIMK2P53671 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17■□□□□ 0.31
LIMK2P53671 RNA5SP415-201ENST00000517246 115 ntBASIC17■□□□□ 0.31
LIMK2P53671 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17■□□□□ 0.31
LIMK2P53671 AC092865.5-201ENST00000545435 363 ntBASIC17■□□□□ 0.31
LIMK2P53671 AC034105.1-201ENST00000563488 319 ntBASIC17■□□□□ 0.31
LIMK2P53671 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LIMK2P53671 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17■□□□□ 0.31
LIMK2P53671 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17■□□□□ 0.31
LIMK2P53671 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LIMK2P53671 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17■□□□□ 0.31
LIMK2P53671 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17■□□□□ 0.31
LIMK2P53671 HNRNPRP1-201ENST00000453465 1695 ntBASIC17■□□□□ 0.31
LIMK2P53671 CYP2T1P-202ENST00000641596 2535 ntBASIC17■□□□□ 0.31
LIMK2P53671 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.99■□□□□ 0.31
LIMK2P53671 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.99■□□□□ 0.31
LIMK2P53671 PRYP5-201ENST00000451909 266 ntBASIC16.99■□□□□ 0.31
LIMK2P53671 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.99■□□□□ 0.31
LIMK2P53671 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.99■□□□□ 0.31
LIMK2P53671 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.99■□□□□ 0.31
LIMK2P53671 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 Z83851.2-201ENST00000609564 659 ntBASIC16.99■□□□□ 0.31
LIMK2P53671 AC027601.4-201ENST00000611259 610 ntBASIC16.99■□□□□ 0.31
LIMK2P53671 FAM197Y3-203ENST00000618346 717 ntBASIC16.99■□□□□ 0.31
LIMK2P53671 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
LIMK2P53671 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK2P53671 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK2P53671 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LIMK2P53671 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK2P53671 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK2P53671 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK2P53671 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LIMK2P53671 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK2P53671 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK2P53671 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LIMK2P53671 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK2P53671 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.98■□□□□ 0.31
LIMK2P53671 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.98■□□□□ 0.31
LIMK2P53671 LINC00982-205ENST00000420957 435 ntBASIC16.98■□□□□ 0.31
LIMK2P53671 AL591424.1-201ENST00000442569 1213 ntBASIC16.98■□□□□ 0.31
LIMK2P53671 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.98■□□□□ 0.31
LIMK2P53671 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK2P53671 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK2P53671 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LIMK2P53671 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK2P53671 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK2P53671 AP002414.3-201ENST00000589352 1468 ntBASIC16.98■□□□□ 0.31
LIMK2P53671 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK2P53671 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms