Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A2P52657 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF2A2P52657 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GTF2A2P52657 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A2P52657 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 AC009113.1-201ENST00000570267 2443 ntBASIC19.22■□□□□ 0.67
GTF2A2P52657 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2A2P52657 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GTF2A2P52657 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.22■□□□□ 0.67
GTF2A2P52657 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
GTF2A2P52657 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.22■□□□□ 0.67
GTF2A2P52657 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2A2P52657 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2A2P52657 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.22■□□□□ 0.67
GTF2A2P52657 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GTF2A2P52657 WASH4P-201ENST00000564273 1246 ntBASIC19.22■□□□□ 0.67
GTF2A2P52657 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.22■□□□□ 0.67
GTF2A2P52657 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2A2P52657 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2A2P52657 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GTF2A2P52657 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A2P52657 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GTF2A2P52657 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
GTF2A2P52657 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GTF2A2P52657 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.21■□□□□ 0.67
GTF2A2P52657 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
GTF2A2P52657 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A2P52657 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.21■□□□□ 0.67
GTF2A2P52657 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GTF2A2P52657 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GTF2A2P52657 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A2P52657 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.21■□□□□ 0.67
GTF2A2P52657 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.21■□□□□ 0.67
GTF2A2P52657 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A2P52657 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.21■□□□□ 0.67
GTF2A2P52657 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
GTF2A2P52657 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
GTF2A2P52657 AC007431.3-201ENST00000623221 587 ntBASIC19.21■□□□□ 0.67
GTF2A2P52657 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A2P52657 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GTF2A2P52657 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GTF2A2P52657 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A2P52657 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 SLC7A15P-201ENST00000424028 1363 ntBASIC19.2■□□□□ 0.66
GTF2A2P52657 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2A2P52657 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2A2P52657 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.2■□□□□ 0.66
GTF2A2P52657 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.2■□□□□ 0.66
GTF2A2P52657 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.2■□□□□ 0.66
GTF2A2P52657 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.2■□□□□ 0.66
GTF2A2P52657 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2A2P52657 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GTF2A2P52657 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2A2P52657 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2A2P52657 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A2P52657 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2A2P52657 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2A2P52657 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2A2P52657 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2A2P52657 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF2A2P52657 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF2A2P52657 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A2P52657 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A2P52657 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A2P52657 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A2P52657 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF2A2P52657 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF2A2P52657 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.19■□□□□ 0.66
GTF2A2P52657 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GTF2A2P52657 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms