Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.69■□□□□ 0.74
MRE11P49959 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
MRE11P49959 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
MRE11P49959 AL662844.1-201ENST00000546340 181 ntBASIC19.69■□□□□ 0.74
MRE11P49959 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.69■□□□□ 0.74
MRE11P49959 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.69■□□□□ 0.74
MRE11P49959 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.69■□□□□ 0.74
MRE11P49959 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MRE11P49959 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRE11P49959 KRT8P47-201ENST00000604727 1398 ntBASIC19.69■□□□□ 0.74
MRE11P49959 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MRE11P49959 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.68■□□□□ 0.74
MRE11P49959 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MRE11P49959 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 MIR574-201ENST00000385209 96 ntBASIC19.68■□□□□ 0.74
MRE11P49959 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 AC112907.2-201ENST00000448639 330 ntBASIC19.68■□□□□ 0.74
MRE11P49959 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.68■□□□□ 0.74
MRE11P49959 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MRE11P49959 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.68■□□□□ 0.74
MRE11P49959 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRE11P49959 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MRE11P49959 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.68■□□□□ 0.74
MRE11P49959 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.68■□□□□ 0.74
MRE11P49959 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.67■□□□□ 0.74
MRE11P49959 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.67■□□□□ 0.74
MRE11P49959 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MRE11P49959 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.67■□□□□ 0.74
MRE11P49959 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.67■□□□□ 0.74
MRE11P49959 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.67■□□□□ 0.74
MRE11P49959 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
MRE11P49959 AC007663.1-201ENST00000438948 1240 ntBASIC19.67■□□□□ 0.74
MRE11P49959 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 AL512604.3-201ENST00000569583 964 ntBASIC19.67■□□□□ 0.74
MRE11P49959 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.67■□□□□ 0.74
MRE11P49959 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
MRE11P49959 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms