Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CASP4P49662 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.34■□□□□ 0.53
CASP4P49662 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.34■□□□□ 0.53
CASP4P49662 AL353732.1-201ENST00000569618 1459 ntBASIC18.34■□□□□ 0.53
CASP4P49662 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP4P49662 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.34■□□□□ 0.53
CASP4P49662 PRSS29P-201ENST00000440800 595 ntBASIC18.34■□□□□ 0.53
CASP4P49662 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 VN2R19P-201ENST00000442399 1052 ntBASIC18.34■□□□□ 0.53
CASP4P49662 FAM185BP-201ENST00000443595 716 ntBASIC18.34■□□□□ 0.53
CASP4P49662 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP4P49662 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.34■□□□□ 0.53
CASP4P49662 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP4P49662 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP4P49662 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.34■□□□□ 0.53
CASP4P49662 AC145285.3-201ENST00000564603 959 ntBASIC18.34■□□□□ 0.53
CASP4P49662 CYP2A7P1-201ENST00000595391 815 ntBASIC18.34■□□□□ 0.53
CASP4P49662 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.34■□□□□ 0.53
CASP4P49662 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.34■□□□□ 0.53
CASP4P49662 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.34■□□□□ 0.53
CASP4P49662 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 AL512652.2-201ENST00000625156 1716 ntBASIC18.34■□□□□ 0.53
CASP4P49662 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CASP4P49662 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP4P49662 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CASP4P49662 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP4P49662 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
CASP4P49662 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.33■□□□□ 0.53
CASP4P49662 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CASP4P49662 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CASP4P49662 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASP4P49662 AC005052.1-201ENST00000625181 2492 ntBASIC18.33■□□□□ 0.53
CASP4P49662 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASP4P49662 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASP4P49662 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.33■□□□□ 0.53
CASP4P49662 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASP4P49662 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CASP4P49662 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASP4P49662 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASP4P49662 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASP4P49662 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.33■□□□□ 0.52
CASP4P49662 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 AC007967.2-201ENST00000432613 625 ntBASIC18.33■□□□□ 0.52
CASP4P49662 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CASP4P49662 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.33■□□□□ 0.52
CASP4P49662 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CASP4P49662 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.33■□□□□ 0.52
CASP4P49662 AL139011.1-202ENST00000642063 584 ntBASIC18.33■□□□□ 0.52
CASP4P49662 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.33■□□□□ 0.52
CASP4P49662 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.33■□□□□ 0.52
CASP4P49662 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
CASP4P49662 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CASP4P49662 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.33■□□□□ 0.52
CASP4P49662 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CASP4P49662 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASP4P49662 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.32■□□□□ 0.52
CASP4P49662 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.32■□□□□ 0.52
CASP4P49662 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CASP4P49662 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CASP4P49662 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CASP4P49662 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.32■□□□□ 0.52
CASP4P49662 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP4P49662 HCG4B-203ENST00000450128 991 ntBASIC18.32■□□□□ 0.52
CASP4P49662 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
CASP4P49662 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.32■□□□□ 0.52
CASP4P49662 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.32■□□□□ 0.52
CASP4P49662 AC005412.3-201ENST00000580309 715 ntBASIC18.32■□□□□ 0.52
CASP4P49662 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.32■□□□□ 0.52
CASP4P49662 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms