Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 AC097374.2-201ENST00000618617 1306 ntBASIC13.37□□□□□ -0.27
CDC34P49427 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDC34P49427 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC34P49427 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 AC126177.1-201ENST00000547829 2218 ntBASIC13.36□□□□□ -0.27
CDC34P49427 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC34P49427 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CDC34P49427 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC34P49427 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 ECEL1P2-202ENST00000465689 757 ntBASIC13.36□□□□□ -0.27
CDC34P49427 AC090192.1-201ENST00000517740 490 ntBASIC13.36□□□□□ -0.27
CDC34P49427 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.36□□□□□ -0.27
CDC34P49427 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
CDC34P49427 AC111152.3-201ENST00000569699 673 ntBASIC13.36□□□□□ -0.27
CDC34P49427 AL136038.4-201ENST00000603606 1261 ntBASIC13.36□□□□□ -0.27
CDC34P49427 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.36□□□□□ -0.27
CDC34P49427 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC34P49427 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC34P49427 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDC34P49427 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CDC34P49427 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
CDC34P49427 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 AC144831.1-201ENST00000573312 2656 ntBASIC13.35□□□□□ -0.27
CDC34P49427 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC34P49427 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CDC34P49427 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC34P49427 HLA-J-202ENST00000469281 1241 ntBASIC13.35□□□□□ -0.27
CDC34P49427 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC34P49427 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 EGLN1P1-201ENST00000531623 762 ntBASIC13.35□□□□□ -0.27
CDC34P49427 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC34P49427 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC34P49427 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms