Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 AL049840.3-201ENST00000602669 611 ntBASIC15.01□□□□□ -0.01
CSNK1A1P48729 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 AC117500.6-201ENST00000624871 588 ntBASIC15.01□□□□□ -0.01
CSNK1A1P48729 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 AC078925.2-201ENST00000624013 1973 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 AL391256.1-201ENST00000443260 1855 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 RNF216P1-203ENST00000404404 2427 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 MRPL20P1-201ENST00000400819 433 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CSNK1A1P48729 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 AC009078.2-202ENST00000463353 338 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 SLC25A6P2-201ENST00000497974 877 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 PENK-208ENST00000523051 772 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 SLC25A6P4-201ENST00000586535 553 ntBASIC15□□□□□ -0.01
CSNK1A1P48729 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CSNK1A1P48729 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1A1P48729 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1A1P48729 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms