Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 AC073621.1-201ENST00000392730 636 ntBASIC16.79■□□□□ 0.28
SLC1A2P43004 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A2P43004 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A2P43004 RPS15P9-201ENST00000494093 319 ntBASIC16.79■□□□□ 0.28
SLC1A2P43004 AC073648.2-201ENST00000510116 352 ntBASIC16.79■□□□□ 0.28
SLC1A2P43004 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A2P43004 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A2P43004 MPDU1-223ENST00000582151 728 ntBASIC16.79■□□□□ 0.28
SLC1A2P43004 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A2P43004 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
SLC1A2P43004 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A2P43004 EMBP1-201ENST00000458200 901 ntBASIC16.78■□□□□ 0.28
SLC1A2P43004 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A2P43004 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A2P43004 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A2P43004 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A2P43004 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.78■□□□□ 0.28
SLC1A2P43004 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A2P43004 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A2P43004 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A2P43004 AL671710.1-201ENST00000610245 2349 ntBASIC16.78■□□□□ 0.28
SLC1A2P43004 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A2P43004 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC1A2P43004 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A2P43004 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC1A2P43004 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A2P43004 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC1A2P43004 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A2P43004 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A2P43004 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A2P43004 DUSP5P1-201ENST00000441325 1139 ntBASIC16.77■□□□□ 0.28
SLC1A2P43004 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC1A2P43004 RNPS1P1-201ENST00000507437 918 ntBASIC16.77■□□□□ 0.28
SLC1A2P43004 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC1A2P43004 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A2P43004 AC107918.2-201ENST00000530817 355 ntBASIC16.77■□□□□ 0.28
SLC1A2P43004 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC1A2P43004 MIR4492-201ENST00000581627 80 ntBASIC16.77■□□□□ 0.28
SLC1A2P43004 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC1A2P43004 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A2P43004 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A2P43004 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A2P43004 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A2P43004 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
SLC1A2P43004 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC1A2P43004 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A2P43004 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A2P43004 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC1A2P43004 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLC1A2P43004 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A2P43004 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.77■□□□□ 0.27
SLC1A2P43004 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A2P43004 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A2P43004 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A2P43004 CYP2T1P-202ENST00000641596 2535 ntBASIC16.76■□□□□ 0.27
SLC1A2P43004 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A2P43004 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms