Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE6BP35913 AC112492.5-201ENST00000421897 457 ntBASIC20.55■□□□□ 0.88
PDE6BP35913 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
PDE6BP35913 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE6BP35913 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDE6BP35913 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE6BP35913 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE6BP35913 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE6BP35913 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE6BP35913 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.55■□□□□ 0.88
PDE6BP35913 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.55■□□□□ 0.88
PDE6BP35913 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6BP35913 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6BP35913 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDE6BP35913 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDE6BP35913 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE6BP35913 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDE6BP35913 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE6BP35913 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 RAB43P1-201ENST00000561790 589 ntBASIC20.54■□□□□ 0.88
PDE6BP35913 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.54■□□□□ 0.88
PDE6BP35913 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PDE6BP35913 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PDE6BP35913 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDE6BP35913 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6BP35913 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDE6BP35913 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PDE6BP35913 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE6BP35913 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.53■□□□□ 0.88
PDE6BP35913 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.53■□□□□ 0.88
PDE6BP35913 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDE6BP35913 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.53■□□□□ 0.88
PDE6BP35913 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE6BP35913 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.53■□□□□ 0.88
PDE6BP35913 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.53■□□□□ 0.88
PDE6BP35913 AL512361.1-201ENST00000554200 418 ntBASIC20.53■□□□□ 0.88
PDE6BP35913 WASH4P-201ENST00000564273 1246 ntBASIC20.53■□□□□ 0.88
PDE6BP35913 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.53■□□□□ 0.88
PDE6BP35913 AC004790.1-201ENST00000612686 536 ntBASIC20.53■□□□□ 0.88
PDE6BP35913 AC007431.3-201ENST00000623221 587 ntBASIC20.53■□□□□ 0.88
PDE6BP35913 SLC7A15P-201ENST00000424028 1363 ntBASIC20.53■□□□□ 0.88
PDE6BP35913 AC116353.5-201ENST00000638148 1699 ntBASIC20.53■□□□□ 0.88
PDE6BP35913 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDE6BP35913 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PDE6BP35913 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.53■□□□□ 0.88
PDE6BP35913 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE6BP35913 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6BP35913 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.53■□□□□ 0.88
PDE6BP35913 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PDE6BP35913 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms