Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 PCDHB17P-201ENST00000539533 2393 ntBASIC15.8■□□□□ 0.12
CHMP24386 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.8■□□□□ 0.12
CHMP24386 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP24386 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP24386 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP24386 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 STK19B-204ENST00000512515 211 ntBASIC15.8■□□□□ 0.12
CHMP24386 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 MTDHP4-201ENST00000600287 670 ntBASIC15.8■□□□□ 0.12
CHMP24386 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CHMP24386 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CHMP24386 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP24386 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP24386 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CHMP24386 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHMP24386 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.79■□□□□ 0.12
CHMP24386 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 AL662844.4-201ENST00000606367 2838 ntBASIC15.79■□□□□ 0.12
CHMP24386 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 HLA-A-201ENST00000376802 1334 ntBASIC15.79■□□□□ 0.12
CHMP24386 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHMP24386 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 AL031284.1-201ENST00000419297 478 ntBASIC15.79■□□□□ 0.12
CHMP24386 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.79■□□□□ 0.12
CHMP24386 SIGLEC30P-201ENST00000455569 941 ntBASIC15.79■□□□□ 0.12
CHMP24386 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.79■□□□□ 0.12
CHMP24386 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.79■□□□□ 0.12
CHMP24386 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.79■□□□□ 0.12
CHMP24386 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHMP24386 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP24386 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms