Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 AC078925.2-201ENST00000624013 1973 ntBASIC17.03■□□□□ 0.32
CCND1P24385 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCND1P24385 HCG4P8-203ENST00000443049 980 ntBASIC17.03■□□□□ 0.32
CCND1P24385 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.03■□□□□ 0.32
CCND1P24385 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.03■□□□□ 0.32
CCND1P24385 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.03■□□□□ 0.32
CCND1P24385 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.03■□□□□ 0.32
CCND1P24385 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCND1P24385 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.03■□□□□ 0.32
CCND1P24385 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.03■□□□□ 0.32
CCND1P24385 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
CCND1P24385 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCND1P24385 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCND1P24385 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.03■□□□□ 0.32
CCND1P24385 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCND1P24385 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.02■□□□□ 0.32
CCND1P24385 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCND1P24385 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CCND1P24385 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCND1P24385 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.02■□□□□ 0.32
CCND1P24385 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.02■□□□□ 0.32
CCND1P24385 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.02■□□□□ 0.32
CCND1P24385 AC099336.1-202ENST00000602961 463 ntBASIC17.02■□□□□ 0.32
CCND1P24385 AC019129.2-201ENST00000609837 1235 ntBASIC17.02■□□□□ 0.32
CCND1P24385 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.02■□□□□ 0.32
CCND1P24385 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCND1P24385 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCND1P24385 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.02■□□□□ 0.31
CCND1P24385 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCND1P24385 INTS4P1-201ENST00000438455 1935 ntBASIC17.02■□□□□ 0.31
CCND1P24385 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.01■□□□□ 0.31
CCND1P24385 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.01■□□□□ 0.31
CCND1P24385 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.01■□□□□ 0.31
CCND1P24385 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCND1P24385 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 NUS1P1-201ENST00000446295 882 ntBASIC17.01■□□□□ 0.31
CCND1P24385 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.01■□□□□ 0.31
CCND1P24385 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.01■□□□□ 0.31
CCND1P24385 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CCND1P24385 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCND1P24385 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
CCND1P24385 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCND1P24385 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCND1P24385 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms