Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPN1P18031 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PTPN1P18031 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTPN1P18031 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 AC105020.1-201ENST00000435356 2205 ntBASIC17.78■□□□□ 0.44
PTPN1P18031 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN1P18031 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN1P18031 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.78■□□□□ 0.44
PTPN1P18031 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 AC109635.5-201ENST00000533593 962 ntBASIC17.78■□□□□ 0.44
PTPN1P18031 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN1P18031 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.78■□□□□ 0.44
PTPN1P18031 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 AL671710.1-201ENST00000610245 2349 ntBASIC17.78■□□□□ 0.44
PTPN1P18031 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN1P18031 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTPN1P18031 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN1P18031 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PTPN1P18031 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 PKD1P1-201ENST00000458669 6805 ntBASIC17.77■□□□□ 0.44
PTPN1P18031 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PTPN1P18031 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 AL671277.1-201ENST00000429656 993 ntBASIC17.77■□□□□ 0.44
PTPN1P18031 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
PTPN1P18031 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN1P18031 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 MIR3909-201ENST00000579518 119 ntBASIC17.77■□□□□ 0.44
PTPN1P18031 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 AL161645.1-201ENST00000622716 1255 ntBASIC17.77■□□□□ 0.44
PTPN1P18031 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
PTPN1P18031 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN1P18031 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PTPN1P18031 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PTPN1P18031 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN1P18031 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN1P18031 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN1P18031 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PTPN1P18031 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.77■□□□□ 0.43
PTPN1P18031 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PTPN1P18031 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN1P18031 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN1P18031 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 SNX33P1-201ENST00000592116 1762 ntBASIC17.76■□□□□ 0.43
PTPN1P18031 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPN1P18031 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN1P18031 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN1P18031 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms