Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GJA1P17302 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GJA1P17302 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GJA1P17302 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GJA1P17302 AC108860.2-201ENST00000562760 2183 ntBASIC17.42■□□□□ 0.38
GJA1P17302 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GJA1P17302 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GJA1P17302 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GJA1P17302 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GJA1P17302 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.41■□□□□ 0.38
GJA1P17302 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GJA1P17302 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GJA1P17302 AL671710.1-201ENST00000610245 2349 ntBASIC17.41■□□□□ 0.38
GJA1P17302 LINC00895-201ENST00000629028 1637 ntBASIC17.41■□□□□ 0.38
GJA1P17302 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.41■□□□□ 0.38
GJA1P17302 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GJA1P17302 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.41■□□□□ 0.38
GJA1P17302 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.41■□□□□ 0.38
GJA1P17302 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GJA1P17302 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.41■□□□□ 0.38
GJA1P17302 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.41■□□□□ 0.38
GJA1P17302 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.41■□□□□ 0.38
GJA1P17302 AC002472.2-201ENST00000442739 958 ntBASIC17.41■□□□□ 0.38
GJA1P17302 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.41■□□□□ 0.38
GJA1P17302 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.41■□□□□ 0.38
GJA1P17302 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.41■□□□□ 0.38
GJA1P17302 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
GJA1P17302 RN7SL204P-201ENST00000582831 262 ntBASIC17.41■□□□□ 0.38
GJA1P17302 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.41■□□□□ 0.38
GJA1P17302 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GJA1P17302 LINC02012-201ENST00000608206 1725 ntBASIC17.41■□□□□ 0.38
GJA1P17302 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 AC092068.3-201ENST00000587894 2016 ntBASIC17.4■□□□□ 0.38
GJA1P17302 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.4■□□□□ 0.38
GJA1P17302 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.4■□□□□ 0.38
GJA1P17302 AC092580.3-201ENST00000430932 139 ntBASIC17.4■□□□□ 0.38
GJA1P17302 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.4■□□□□ 0.38
GJA1P17302 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.4■□□□□ 0.38
GJA1P17302 AC069120.2-201ENST00000524091 540 ntBASIC17.4■□□□□ 0.38
GJA1P17302 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.4■□□□□ 0.38
GJA1P17302 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.4■□□□□ 0.38
GJA1P17302 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.4■□□□□ 0.38
GJA1P17302 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.4■□□□□ 0.38
GJA1P17302 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
GJA1P17302 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GJA1P17302 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GJA1P17302 NOC2LP2-201ENST00000407594 1944 ntBASIC17.39■□□□□ 0.37
GJA1P17302 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
GJA1P17302 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.39■□□□□ 0.37
GJA1P17302 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.39■□□□□ 0.37
GJA1P17302 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.39■□□□□ 0.37
GJA1P17302 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GJA1P17302 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.39■□□□□ 0.37
GJA1P17302 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.39■□□□□ 0.37
GJA1P17302 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms