Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 SLC25A6P5-201ENST00000435663 894 ntBASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 U91328.1-201ENST00000437528 223 ntBASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 RN7SL828P-201ENST00000607615 303 ntBASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSB-PGBD3P0DP91 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CSB-PGBD3P0DP91 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CSB-PGBD3P0DP91 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CSB-PGBD3P0DP91 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CSB-PGBD3P0DP91 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CSB-PGBD3P0DP91 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CSB-PGBD3P0DP91 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CSB-PGBD3P0DP91 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 API5-211ENST00000534695 560 ntTSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 AC140912.1-201ENST00000577171 1054 ntBASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 SPTSSB-204ENST00000617024 1292 ntBASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 SERF2-217ENST00000630046 862 ntTSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.14■■□□□ 1.13
CSB-PGBD3P0DP91 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 AL353779.1-201ENST00000434793 351 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 GPR53P-205ENST00000457298 1084 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 IGHV3-71-201ENST00000523324 359 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 RNA5-8SN1-201ENST00000610460 153 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 RNA5-8SN5-202ENST00000612463 153 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 RNA5-8SN4-201ENST00000613359 153 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 RNA5-8SN5-201ENST00000619471 153 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 AC004840.1-201ENST00000636359 365 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 AL354751.1-201ENST00000412768 1863 ntBASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSB-PGBD3P0DP91 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 GNAQP1-201ENST00000444815 1067 ntBASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC22.12■■□□□ 1.13
CSB-PGBD3P0DP91 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms