Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC4P09017 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC4P09017 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HOXC4P09017 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HOXC4P09017 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
HOXC4P09017 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXC4P09017 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXC4P09017 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.33■□□□□ 0.2
HOXC4P09017 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC4P09017 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC4P09017 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 AC106028.4-201ENST00000614509 607 ntBASIC16.33■□□□□ 0.2
HOXC4P09017 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC4P09017 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HOXC4P09017 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HOXC4P09017 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.33■□□□□ 0.2
HOXC4P09017 AL512652.2-201ENST00000625156 1716 ntBASIC16.33■□□□□ 0.2
HOXC4P09017 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HOXC4P09017 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC4P09017 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC4P09017 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC4P09017 AC006538.1-201ENST00000567905 1585 ntBASIC16.32■□□□□ 0.2
HOXC4P09017 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXC4P09017 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC4P09017 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXC4P09017 AP001094.4-201ENST00000579008 2176 ntBASIC16.32■□□□□ 0.2
HOXC4P09017 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXC4P09017 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.32■□□□□ 0.2
HOXC4P09017 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.32■□□□□ 0.2
HOXC4P09017 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXC4P09017 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC4P09017 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 AC073439.1-201ENST00000624121 1774 ntBASIC16.31■□□□□ 0.2
HOXC4P09017 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC4P09017 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HOXC4P09017 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXC4P09017 TUBB3P1-201ENST00000405796 1332 ntBASIC16.31■□□□□ 0.2
HOXC4P09017 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HOXC4P09017 MIR770-201ENST00000390219 98 ntBASIC16.31■□□□□ 0.2
HOXC4P09017 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC4P09017 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HOXC4P09017 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 PCDHB18P-201ENST00000524813 2368 ntBASIC16.31■□□□□ 0.2
HOXC4P09017 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
HOXC4P09017 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HOXC4P09017 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HOXC4P09017 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC4P09017 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC4P09017 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HOXC4P09017 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC4P09017 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HOXC4P09017 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC4P09017 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC4P09017 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC4P09017 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HOXC4P09017 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HOXC4P09017 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms