Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL2A1P02458 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL2A1P02458 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.42■□□□□ 0.7
COL2A1P02458 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL2A1P02458 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL2A1P02458 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.42■□□□□ 0.7
COL2A1P02458 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.41■□□□□ 0.7
COL2A1P02458 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.41■□□□□ 0.7
COL2A1P02458 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 GAPDHP21-201ENST00000450301 1010 ntBASIC19.41■□□□□ 0.7
COL2A1P02458 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.41■□□□□ 0.7
COL2A1P02458 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
COL2A1P02458 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL2A1P02458 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.41■□□□□ 0.7
COL2A1P02458 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL2A1P02458 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COL2A1P02458 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.41■□□□□ 0.7
COL2A1P02458 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL2A1P02458 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COL2A1P02458 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL2A1P02458 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
COL2A1P02458 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
COL2A1P02458 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.41■□□□□ 0.7
COL2A1P02458 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL2A1P02458 GK-202ENST00000378941 458 ntTSL 3 BASIC19.41■□□□□ 0.7
COL2A1P02458 AC010336.2-201ENST00000564226 506 ntBASIC19.41■□□□□ 0.7
COL2A1P02458 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COL2A1P02458 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COL2A1P02458 AC025048.6-201ENST00000634326 1161 ntBASIC19.41■□□□□ 0.7
COL2A1P02458 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
COL2A1P02458 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 BTBD7P1-201ENST00000447253 1453 ntBASIC19.4■□□□□ 0.7
COL2A1P02458 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.4■□□□□ 0.7
COL2A1P02458 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL2A1P02458 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL2A1P02458 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.4■□□□□ 0.7
COL2A1P02458 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL2A1P02458 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL2A1P02458 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.4■□□□□ 0.7
COL2A1P02458 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.4■□□□□ 0.7
COL2A1P02458 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.4■□□□□ 0.7
COL2A1P02458 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL2A1P02458 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL2A1P02458 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.4■□□□□ 0.7
COL2A1P02458 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.4■□□□□ 0.7
COL2A1P02458 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.4■□□□□ 0.7
COL2A1P02458 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.4■□□□□ 0.7
COL2A1P02458 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL2A1P02458 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL2A1P02458 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.4■□□□□ 0.7
COL2A1P02458 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.4■□□□□ 0.7
COL2A1P02458 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
COL2A1P02458 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL2A1P02458 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.39■□□□□ 0.69
COL2A1P02458 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.39■□□□□ 0.69
COL2A1P02458 AP005018.1-201ENST00000525475 301 ntBASIC19.39■□□□□ 0.69
COL2A1P02458 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.39■□□□□ 0.69
COL2A1P02458 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.39■□□□□ 0.69
COL2A1P02458 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
COL2A1P02458 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL2A1P02458 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 AC006538.1-201ENST00000567905 1585 ntBASIC19.38■□□□□ 0.69
COL2A1P02458 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.38■□□□□ 0.69
COL2A1P02458 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL2A1P02458 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL2A1P02458 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms