Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRACP01848 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRACP01848 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRACP01848 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRACP01848 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRACP01848 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 AC026748.1-201ENST00000624349 3251 ntBASIC10.97□□□□□ -0.65
TRACP01848 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 AC010491.1-201ENST00000563101 2797 ntBASIC10.97□□□□□ -0.65
TRACP01848 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 AC026396.1-201ENST00000419388 421 ntBASIC10.97□□□□□ -0.65
TRACP01848 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 PRKY-204ENST00000533551 1019 ntBASIC10.97□□□□□ -0.65
TRACP01848 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 REXO2-208ENST00000539754 791 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
TRACP01848 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC10.97□□□□□ -0.65
TRACP01848 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC10.97□□□□□ -0.65
TRACP01848 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 LINC00167-201ENST00000530583 1419 ntBASIC10.97□□□□□ -0.65
TRACP01848 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TRACP01848 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRACP01848 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.97□□□□□ -0.65
TRACP01848 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
TRACP01848 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.96□□□□□ -0.65
TRACP01848 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.96□□□□□ -0.65
TRACP01848 SNX18-202ENST00000343017 3140 ntBASIC10.96□□□□□ -0.65
TRACP01848 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
TRACP01848 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRACP01848 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC10.96□□□□□ -0.65
TRACP01848 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC10.96□□□□□ -0.65
TRACP01848 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 NBPF21P-201ENST00000425093 1451 ntBASIC10.96□□□□□ -0.65
TRACP01848 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC10.96□□□□□ -0.65
TRACP01848 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRACP01848 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
TRACP01848 STX7-201ENST00000367937 1090 ntTSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms