Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 SPDYE17-201ENST00000412399 783 ntBASIC18.99■□□□□ 0.63
ALDH1A1P00352 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.99■□□□□ 0.63
ALDH1A1P00352 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 CROCCP4-201ENST00000457096 498 ntBASIC18.99■□□□□ 0.63
ALDH1A1P00352 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.99■□□□□ 0.63
ALDH1A1P00352 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ALDH1A1P00352 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALDH1A1P00352 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 ANKRD19P-201ENST00000338192 862 ntBASIC18.98■□□□□ 0.63
ALDH1A1P00352 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 MIR1908-201ENST00000410394 80 ntBASIC18.98■□□□□ 0.63
ALDH1A1P00352 AC098850.1-201ENST00000419919 790 ntBASIC18.98■□□□□ 0.63
ALDH1A1P00352 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 MIR8072-201ENST00000614241 80 ntBASIC18.98■□□□□ 0.63
ALDH1A1P00352 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALDH1A1P00352 TUBB1P2-201ENST00000422712 1306 ntBASIC18.98■□□□□ 0.63
ALDH1A1P00352 TUBB1P1-201ENST00000503144 1300 ntBASIC18.98■□□□□ 0.63
ALDH1A1P00352 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
ALDH1A1P00352 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ALDH1A1P00352 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALDH1A1P00352 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALDH1A1P00352 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 AC104596.2-201ENST00000512793 793 ntBASIC18.97■□□□□ 0.63
ALDH1A1P00352 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ALDH1A1P00352 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.97■□□□□ 0.63
ALDH1A1P00352 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALDH1A1P00352 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALDH1A1P00352 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALDH1A1P00352 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ALDH1A1P00352 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms