Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.98■□□□□ 0.15
CLPTM1O96005 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLPTM1O96005 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 FLJ16779-201ENST00000612722 7638 ntBASIC15.97■□□□□ 0.15
CLPTM1O96005 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLPTM1O96005 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.97■□□□□ 0.15
CLPTM1O96005 TSPY5P-201ENST00000426936 936 ntBASIC15.97■□□□□ 0.15
CLPTM1O96005 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.97■□□□□ 0.15
CLPTM1O96005 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.97■□□□□ 0.15
CLPTM1O96005 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.97■□□□□ 0.15
CLPTM1O96005 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLPTM1O96005 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.97■□□□□ 0.15
CLPTM1O96005 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 AL031432.5-201ENST00000641059 760 ntBASIC15.97■□□□□ 0.15
CLPTM1O96005 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.97■□□□□ 0.15
CLPTM1O96005 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CLPTM1O96005 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.97■□□□□ 0.15
CLPTM1O96005 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLPTM1O96005 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLPTM1O96005 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 AC067930.6-201ENST00000623257 4947 ntBASIC15.97■□□□□ 0.15
CLPTM1O96005 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLPTM1O96005 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLPTM1O96005 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 AC006538.1-201ENST00000567905 1585 ntBASIC15.96■□□□□ 0.15
CLPTM1O96005 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLPTM1O96005 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPTM1O96005 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CLPTM1O96005 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLPTM1O96005 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.96■□□□□ 0.15
CLPTM1O96005 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPTM1O96005 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.96■□□□□ 0.15
CLPTM1O96005 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLPTM1O96005 AP000523.1-201ENST00000398242 1049 ntBASIC15.96■□□□□ 0.15
CLPTM1O96005 KRT18P23-201ENST00000435622 1283 ntBASIC15.96■□□□□ 0.15
CLPTM1O96005 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.96■□□□□ 0.15
CLPTM1O96005 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.96■□□□□ 0.15
CLPTM1O96005 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPTM1O96005 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.96■□□□□ 0.15
CLPTM1O96005 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.96■□□□□ 0.15
CLPTM1O96005 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPTM1O96005 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPTM1O96005 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPTM1O96005 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPTM1O96005 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPTM1O96005 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPTM1O96005 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPTM1O96005 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.95■□□□□ 0.14
CLPTM1O96005 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.95■□□□□ 0.14
CLPTM1O96005 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 HLA-A-202ENST00000376806 1854 ntBASIC15.95■□□□□ 0.14
CLPTM1O96005 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.95■□□□□ 0.14
CLPTM1O96005 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPTM1O96005 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLPTM1O96005 SLC25A1P3-201ENST00000395415 828 ntBASIC15.95■□□□□ 0.14
CLPTM1O96005 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms