Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LGR5O75473 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.62■□□□□ 0.57
LGR5O75473 SLC25A39P2-201ENST00000537614 270 ntBASIC18.62■□□□□ 0.57
LGR5O75473 AL138918.1-201ENST00000568306 659 ntBASIC18.62■□□□□ 0.57
LGR5O75473 AC051619.7-201ENST00000568314 623 ntBASIC18.62■□□□□ 0.57
LGR5O75473 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.62■□□□□ 0.57
LGR5O75473 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.62■□□□□ 0.57
LGR5O75473 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.62■□□□□ 0.57
LGR5O75473 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LGR5O75473 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.62■□□□□ 0.57
LGR5O75473 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.62■□□□□ 0.57
LGR5O75473 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.62■□□□□ 0.57
LGR5O75473 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
LGR5O75473 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
LGR5O75473 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LGR5O75473 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.61■□□□□ 0.57
LGR5O75473 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LGR5O75473 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.61■□□□□ 0.57
LGR5O75473 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.61■□□□□ 0.57
LGR5O75473 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.61■□□□□ 0.57
LGR5O75473 SPDYE14P-201ENST00000442619 822 ntBASIC18.61■□□□□ 0.57
LGR5O75473 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LGR5O75473 INGX-202ENST00000489074 768 ntBASIC18.61■□□□□ 0.57
LGR5O75473 AC026150.2-201ENST00000564693 1156 ntBASIC18.61■□□□□ 0.57
LGR5O75473 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.61■□□□□ 0.57
LGR5O75473 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
LGR5O75473 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
LGR5O75473 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.61■□□□□ 0.57
LGR5O75473 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LGR5O75473 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LGR5O75473 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LGR5O75473 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
LGR5O75473 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 PCDHB17P-201ENST00000539533 2393 ntBASIC18.6■□□□□ 0.57
LGR5O75473 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 TUBB3P1-201ENST00000405796 1332 ntBASIC18.6■□□□□ 0.57
LGR5O75473 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.6■□□□□ 0.57
LGR5O75473 AC055876.3-201ENST00000431496 288 ntBASIC18.6■□□□□ 0.57
LGR5O75473 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 AC073389.1-201ENST00000595595 795 ntBASIC18.6■□□□□ 0.57
LGR5O75473 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 AC138649.4-201ENST00000612222 287 ntBASIC18.6■□□□□ 0.57
LGR5O75473 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms