Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.93■□□□□ 0.14
PLOD3O60568 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PLOD3O60568 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PLOD3O60568 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.93■□□□□ 0.14
PLOD3O60568 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PLOD3O60568 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PLOD3O60568 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.93■□□□□ 0.14
PLOD3O60568 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PLOD3O60568 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.93■□□□□ 0.14
PLOD3O60568 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PLOD3O60568 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 AL021920.2-201ENST00000624828 1351 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
PLOD3O60568 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 RPS2P28-201ENST00000314255 741 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.92■□□□□ 0.14
PLOD3O60568 AC073621.1-201ENST00000392730 636 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 PTCHD3P3-201ENST00000403073 906 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.92■□□□□ 0.14
PLOD3O60568 ELK2BP-201ENST00000415014 1224 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.92■□□□□ 0.14
PLOD3O60568 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.92■□□□□ 0.14
PLOD3O60568 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.92■□□□□ 0.14
PLOD3O60568 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 AL160237.2-201ENST00000556165 472 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.92■□□□□ 0.14
PLOD3O60568 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.92■□□□□ 0.14
PLOD3O60568 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 AL031008.1-201ENST00000619963 541 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.92■□□□□ 0.14
PLOD3O60568 AC005915.1-201ENST00000624912 2018 ntBASIC15.92■□□□□ 0.14
PLOD3O60568 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PLOD3O60568 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PLOD3O60568 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PLOD3O60568 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PLOD3O60568 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PLOD3O60568 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.91■□□□□ 0.14
PLOD3O60568 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PLOD3O60568 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 HNRNPDP1-201ENST00000439535 754 ntBASIC15.91■□□□□ 0.14
PLOD3O60568 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 AC136632.2-201ENST00000512891 861 ntBASIC15.91■□□□□ 0.14
PLOD3O60568 AP002469.2-201ENST00000531724 424 ntBASIC15.91■□□□□ 0.14
PLOD3O60568 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.91■□□□□ 0.14
PLOD3O60568 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.91■□□□□ 0.14
PLOD3O60568 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.91■□□□□ 0.14
PLOD3O60568 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.91■□□□□ 0.14
PLOD3O60568 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.91■□□□□ 0.14
PLOD3O60568 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PLOD3O60568 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms