Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
FOXN1O15353 AC106886.1-201ENST00000568660 600 ntBASIC20.07■□□□□ 0.8
FOXN1O15353 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXN1O15353 AC003101.2-201ENST00000612557 442 ntBASIC20.07■□□□□ 0.8
FOXN1O15353 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXN1O15353 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FOXN1O15353 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXN1O15353 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FOXN1O15353 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
FOXN1O15353 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXN1O15353 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
FOXN1O15353 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXN1O15353 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
FOXN1O15353 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXN1O15353 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
FOXN1O15353 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXN1O15353 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FOXN1O15353 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FOXN1O15353 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXN1O15353 AC133963.1-201ENST00000504166 1679 ntBASIC20.06■□□□□ 0.8
FOXN1O15353 UXT-AS1-201ENST00000590504 1525 ntBASIC20.06■□□□□ 0.8
FOXN1O15353 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN1O15353 KRT8P44-201ENST00000441609 1350 ntBASIC20.06■□□□□ 0.8
FOXN1O15353 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FOXN1O15353 CROCCP2-202ENST00000412962 2773 ntBASIC20.06■□□□□ 0.8
FOXN1O15353 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FOXN1O15353 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN1O15353 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXN1O15353 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
FOXN1O15353 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
FOXN1O15353 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN1O15353 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN1O15353 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 AC140658.5-201ENST00000438532 169 ntBASIC20.05■□□□□ 0.8
FOXN1O15353 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXN1O15353 AC027369.6-201ENST00000525520 931 ntBASIC20.05■□□□□ 0.8
FOXN1O15353 API5-211ENST00000534695 560 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN1O15353 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.05■□□□□ 0.8
FOXN1O15353 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXN1O15353 AC140912.1-201ENST00000577171 1054 ntBASIC20.05■□□□□ 0.8
FOXN1O15353 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN1O15353 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXN1O15353 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
FOXN1O15353 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN1O15353 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXN1O15353 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
FOXN1O15353 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 AC022211.2-201ENST00000585075 2527 ntBASIC20.04■□□□□ 0.8
FOXN1O15353 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 AC009053.2-201ENST00000563701 2365 ntBASIC20.04■□□□□ 0.8
FOXN1O15353 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXN1O15353 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 IGHV3-62-201ENST00000520057 340 ntBASIC20.04■□□□□ 0.8
FOXN1O15353 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXN1O15353 AC019129.2-201ENST00000609837 1235 ntBASIC20.04■□□□□ 0.8
FOXN1O15353 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FOXN1O15353 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms