Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
PCDH17O14917 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH17O14917 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 PCDH8P1-201ENST00000428983 2773 ntBASIC16.12■□□□□ 0.17
PCDH17O14917 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH17O14917 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH17O14917 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PCDH17O14917 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PCDH17O14917 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDH17O14917 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH17O14917 AC004832.2-201ENST00000426397 482 ntBASIC16.12■□□□□ 0.17
PCDH17O14917 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH17O14917 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH17O14917 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH17O14917 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH17O14917 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH17O14917 MIR4751-201ENST00000578027 74 ntBASIC16.12■□□□□ 0.17
PCDH17O14917 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH17O14917 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH17O14917 AC064836.3-201ENST00000607928 673 ntBASIC16.12■□□□□ 0.17
PCDH17O14917 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH17O14917 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH17O14917 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH17O14917 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 AC002310.6-201ENST00000624451 1377 ntBASIC16.12■□□□□ 0.17
PCDH17O14917 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH17O14917 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 AC092053.1-201ENST00000605787 1936 ntBASIC16.11■□□□□ 0.17
PCDH17O14917 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PCDH17O14917 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH17O14917 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
PCDH17O14917 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDH17O14917 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDH17O14917 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDH17O14917 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDH17O14917 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDH17O14917 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDH17O14917 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH17O14917 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH17O14917 LINC02012-201ENST00000608206 1725 ntBASIC16.11■□□□□ 0.17
PCDH17O14917 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDH17O14917 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH17O14917 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
PCDH17O14917 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDH17O14917 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms