Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.7■□□□□ 0.42
SOX1O00570 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.7■□□□□ 0.42
SOX1O00570 TDH-203ENST00000531764 1110 ntBASIC17.7■□□□□ 0.42
SOX1O00570 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SOX1O00570 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
SOX1O00570 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.7■□□□□ 0.42
SOX1O00570 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX1O00570 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX1O00570 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SOX1O00570 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.7■□□□□ 0.42
SOX1O00570 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.7■□□□□ 0.42
SOX1O00570 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SOX1O00570 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.7■□□□□ 0.42
SOX1O00570 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SOX1O00570 AC120498.9-201ENST00000339021 3867 ntBASIC17.7■□□□□ 0.42
SOX1O00570 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.69■□□□□ 0.42
SOX1O00570 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SOX1O00570 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.69■□□□□ 0.42
SOX1O00570 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.69■□□□□ 0.42
SOX1O00570 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX1O00570 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 MIR326-201ENST00000362220 95 ntBASIC17.69■□□□□ 0.42
SOX1O00570 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.69■□□□□ 0.42
SOX1O00570 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SOX1O00570 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.69■□□□□ 0.42
SOX1O00570 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.69■□□□□ 0.42
SOX1O00570 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.69■□□□□ 0.42
SOX1O00570 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.69■□□□□ 0.42
SOX1O00570 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SOX1O00570 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SOX1O00570 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX1O00570 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SOX1O00570 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.69■□□□□ 0.42
SOX1O00570 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SOX1O00570 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX1O00570 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SOX1O00570 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 MIR33B-201ENST00000385104 96 ntBASIC17.68■□□□□ 0.42
SOX1O00570 AL355334.1-201ENST00000417713 215 ntBASIC17.68■□□□□ 0.42
SOX1O00570 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.68■□□□□ 0.42
SOX1O00570 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.68■□□□□ 0.42
SOX1O00570 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SOX1O00570 AC005077.2-201ENST00000449786 690 ntBASIC17.68■□□□□ 0.42
SOX1O00570 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 TMEM198B-204ENST00000484016 896 ntBASIC17.68■□□□□ 0.42
SOX1O00570 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.68■□□□□ 0.42
SOX1O00570 AC104596.2-201ENST00000512793 793 ntBASIC17.68■□□□□ 0.42
SOX1O00570 FAM86HP-204ENST00000513466 959 ntBASIC17.68■□□□□ 0.42
SOX1O00570 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.68■□□□□ 0.42
SOX1O00570 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.68■□□□□ 0.42
SOX1O00570 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.68■□□□□ 0.42
SOX1O00570 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.68■□□□□ 0.42
SOX1O00570 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.68■□□□□ 0.42
SOX1O00570 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SOX1O00570 AC021097.1-201ENST00000607902 574 ntBASIC17.68■□□□□ 0.42
SOX1O00570 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SOX1O00570 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SOX1O00570 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SOX1O00570 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.67■□□□□ 0.42
SOX1O00570 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.67■□□□□ 0.42
SOX1O00570 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SOX1O00570 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms