Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AC092364.2-201ENST00000596710 2692 ntBASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AP000867.3-201ENST00000524675 377 ntBASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AC087388.1-201ENST00000571370 1112 ntBASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AC010331.1-201ENST00000611423 582 ntBASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 AC006538.1-201ENST00000567905 1585 ntBASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 ALOX12P2-203ENST00000570921 1945 ntBASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 KRT8P49-201ENST00000604166 1432 ntBASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AC079776.2-201ENST00000641154 1609 ntBASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 LINC02199-201ENST00000506655 2702 ntBASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AC012615.1-201ENST00000565797 1299 ntBASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AC099336.1-202ENST00000602961 463 ntBASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AC073592.4-201ENST00000623827 446 ntBASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms