Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC003669.1-201ENST00000334569 611 ntBASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC005521.1-201ENST00000393351 872 ntBASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 KLF4P1-201ENST00000412782 1185 ntBASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AK4P3-201ENST00000418260 669 ntBASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC092647.4-201ENST00000457211 535 ntBASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV5A0A0B4J249 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.15□□□□□ -0.31
TRAV5A0A0B4J249 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.15□□□□□ -0.31
TRAV5A0A0B4J249 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV5A0A0B4J249 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV5A0A0B4J249 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AC083849.1-201ENST00000615227 514 ntBASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AC006011.2-201ENST00000621313 1158 ntBASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV5A0A0B4J249 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms