Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC073439.1-201ENST00000624121 1774 ntBASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AL353779.1-201ENST00000434793 351 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AC140912.1-201ENST00000577171 1054 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 SPTSSB-204ENST00000617024 1292 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AC004840.1-201ENST00000636359 365 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AC138969.3-201ENST00000546612 1459 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AC138932.2-201ENST00000548268 1459 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AC126755.4-201ENST00000549796 1459 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 AC116353.5-201ENST00000638148 1699 ntBASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC2Q9Y5Z7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 AC108860.2-201ENST00000562760 2183 ntBASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC2Q9Y5Z7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.46■□□□□ 0.38
HCFC2Q9Y5Z7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms