Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 MTDHP3-201ENST00000594186 672 ntBASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 AL732292.2-201ENST00000609649 430 ntBASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 GGT3P-204ENST00000453783 1664 ntBASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 MIR4492-201ENST00000581627 80 ntBASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA3Q9Y5H8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 AL355877.3-201ENST00000622820 899 ntBASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 AC093458.2-201ENST00000623150 629 ntBASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 AL512652.2-201ENST00000625156 1716 ntBASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 AL671710.1-201ENST00000610245 2349 ntBASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA3Q9Y5H8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms