Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 CNN2P11-201ENST00000429351 262 ntBASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 C20orf181-201ENST00000623918 480 ntBASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 VN2R19P-201ENST00000442399 1052 ntBASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 AL805961.1-202ENST00000641562 540 ntBASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB1Q9Y5F3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 PAWRP1-201ENST00000451083 565 ntBASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 AC011676.5-201ENST00000624864 2660 ntBASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB1Q9Y5F3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 PTCHD3P3-201ENST00000403073 906 ntBASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 HCG4B-203ENST00000450128 991 ntBASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 AC106028.4-201ENST00000614509 607 ntBASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms