Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC009093.7-201ENST00000623853 1223 ntBASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AC243562.1-201ENST00000560672 389 ntBASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AC131009.4-201ENST00000624048 1740 ntBASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDP1Q9Y5B0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 AC109635.5-201ENST00000533593 962 ntBASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 AC116353.5-201ENST00000638148 1699 ntBASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDP1Q9Y5B0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 KRT8P49-201ENST00000604166 1432 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 PMS2P4-201ENST00000412466 1052 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 AC092474.2-201ENST00000424288 719 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 AC067863.1-201ENST00000494933 530 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 AC093520.2-201ENST00000561830 333 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 MPDU1-223ENST00000582151 728 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 AC092364.2-202ENST00000597012 1073 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms