Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SIGLEC16-201ENST00000599858 1437 ntBASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 AC132008.2-207ENST00000454517 770 ntBASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 BX005266.1-201ENST00000473402 457 ntBASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 AP001269.4-201ENST00000609611 512 ntBASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR1DQ9Y2S0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 LINC00982-205ENST00000420957 435 ntBASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 FRMD8P1-201ENST00000440433 1524 ntBASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 TUBB8P12-201ENST00000308911 1335 ntBASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 TUBB7P-202ENST00000428444 1305 ntBASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 TUBB8P7-204ENST00000567960 1332 ntBASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR1DQ9Y2S0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 AP005117.1-201ENST00000584346 1413 ntBASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR1DQ9Y2S0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms